Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015817575.1_cds_XP_016499241.1_13183
CDS Infomation

[gene=LOC107817863] [db_xref=GeneID:107817863] [protein=F-box protein At5g06550-like] [protein_id=XP_016499241.1] [location=complement(join(18964..19204,20756..22041))] [gbkey=CDS]
Sequence

ATGCTGGGTTCCAAGACTTTGATATTCAAGAAGCAAAAACGAAAGAGAAAAAATGGGAAG
AGCATAAAATCAAAGAAAATTTCAGTTTCCACAAAAGAAGAAAAGGTTACCAAATCACAC
CAAATAACACCACAAGAAGAAGAAGATGGCGAGGGTTTCAGCTTGAAAGCATCAGCACAA
TCAGATTCTCATGGAGTTCAGCCACTTGGGAATCTTTATTTCAACCCATCATCTCATAAT
TCAAGAAATACTGGCCTAGGTAATCTCAAGACTTTAACTGATGAGCTTGTTCTTGATATT
TTAGGCCTTTTAGAAGGTACCCATTTAGGTATTTTGTCAAATGTAAGCAAAGGTTTCTAT
ATTTTTTGTAACCATGAACCCCTTTGGAGGAATCTTGTATTAGAGACTTGTAAAGGTGGG
TTCTCTTTTAAGGGTTCTTGGAAGTCTACTTTTGTTAGTGCATATAAGCAGCCTTCATTT
CCAGTTTTGAGTTCTGGTTTGAAAGTTAGAGACTTTTATTCTGATTACTTGTTTCAGAGT
TGGTTATGTGCTAATCTTGAAATGAAACCTGAATGGCTAGAAAAGGATAATATTGTAAGG
AGGAGAGGAATCTCTGTGGATGAGTTTGTTATGAATTTTGAGGAACCGAATAAGCCGGTT
TTGTTAGAAGGGTGCTTGGAAAGTTGGCCTGCATTGGAGAAATGGAATAGGGATTATTTA
GTTGAGGAGTGTGGAGATGTGAAATTTTCAGTTGGGCTGGTGGAAATGAAACTTGAGGAC
TATTTTAGCTACTCTGATCAAGCGAGGGAAGAAAGGCCATTGTATTTGTTTGATCCAAAG
TTTGCGGAGAAAGTTCCTCAGTTAGGAAAGGATTATGATGCCCCTATGTACTTCAACGAG
GATTTGTTTAGTGTATTGGGTAGTGAGAGGCCGGATTATAGGTGGATTATAATTGGACCT
GCAGGCTCTGGCTCGTCATTCCACATTGATCCGAATTCTACCTCTGCTTGGAATGCGGTA
ATCAAAGGATCCAAGAAATGGGTGTTGTTTCCACCTGATGTGGTTCCACCCGGGGTTCAT
CCGAGCCCTGACGGCGCAGAAGTAGCAAGTCCTGTTTCGATAATAGAATGGTTCATGAAC
TTTTATAATGCAACCAAGAATTGGAAAAAGAGACCTATTGAGTGTGTCTGCAAGGCCGGG
GAAGTAATCTTTGTACCTAATGGATGGTGGCATTTGGTCATCAATTTAGAGGATTCAATT
GCCATTACCCAGAACTTTGTTAGCAGAAGGAATTTACTGAATGTTCTGGAATTTCTAAAA
AAGCCAAATGCTTGCACTCTTGTGTCGGGAACAAGTGACAGAGTCAATTTGCACGACAAA
TTTAAGAATGCCATTGAAGCATATCTTCCCGGTACTATTGGTGAGTTGACTCTGAAGGAC
GAGGAGAAAAAAGCCCAGCAGAAGAAACCTTCCTTCTGGGAATCGGTCACTGATTCAAAA
GCAGGCGCTTTCAAATTTTCTTTTTGA

Peptide Sequence

PEP ID

XP_016499241.1
PEP Infomation

PREDICTED: F-box protein At5g06550-like [Nicotiana tabacum]
Sequence

MLGSKTLIFKKQKRKRKNGKSIKSKKISVSTKEEKVTKSHQITPQEEEDGEGFSLKASAQ
SDSHGVQPLGNLYFNPSSHNSRNTGLGNLKTLTDELVLDILGLLEGTHLGILSNVSKGFY
IFCNHEPLWRNLVLETCKGGFSFKGSWKSTFVSAYKQPSFPVLSSGLKVRDFYSDYLFQS
WLCANLEMKPEWLEKDNIVRRRGISVDEFVMNFEEPNKPVLLEGCLESWPALEKWNRDYL
VEECGDVKFSVGLVEMKLEDYFSYSDQAREERPLYLFDPKFAEKVPQLGKDYDAPMYFNE
DLFSVLGSERPDYRWIIIGPAGSGSSFHIDPNSTSAWNAVIKGSKKWVLFPPDVVPPGVH
PSPDGAEVASPVSIIEWFMNFYNATKNWKKRPIECVCKAGEVIFVPNGWWHLVINLEDSI
AITQNFVSRRNLLNVLEFLKKPNACTLVSGTSDRVNLHDKFKNAIEAYLPGTIGELTLKD
EEKKAQQKKPSFWESVTDSKAGAFKFSF

Transcript Sequence

Gene sequence data has not been registered.